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Status: Open.

#18 In shenorrLabTRDF/bseqsc;

· abulislam opened on May 21, 2023

Error in out[[t]]$coefs

Status: Open.

#17 In shenorrLabTRDF/bseqsc;

· Li-Rui091 opened on Aug 15, 2022

CIBERSORTx

Status: Open.

#15 In shenorrLabTRDF/bseqsc;

· wibll opened on Jan 12, 2021

How to normalize and calculate the gene expression of bulk RNA seq and scRNA seq？

Status: Open.

#14 In shenorrLabTRDF/bseqsc;

· byb-paper opened on Nov 9, 2020

Error Running CIBERSORT to estimate proportion

Status: Open.

#13 In shenorrLabTRDF/bseqsc;

· soleilll opened on Aug 27, 2020

DEseq with bseqsc package

Status: Open.

#12 In shenorrLabTRDF/bseqsc;

· nfancy opened on Oct 29, 2019

Model is empty!

Status: Open.

#11 In shenorrLabTRDF/bseqsc;

· Kai6662 opened on Oct 29, 2019

Error in array(NA_real_, dim = c(nrow(b), ncol(cc), length(lev)), dimnames = c(rownames(b), : length of 'dimnames' [1686] must match that of 'dims' [3]

Status: Open.

#10 In shenorrLabTRDF/bseqsc;

· charlesgwellem opened on Aug 29, 2019

Error in dimnames(covmat.unscaled) <- list(xnames, xnames) : length of 'dimnames' [1] not equal to array extent

Status: Open.

#9 In shenorrLabTRDF/bseqsc;

· charlesgwellem opened on Aug 6, 2019

Error in mutate(edger_pvals, Regulated = Adjusted <= 0.01 & Adjusted <= : could not find function "mutate"

Status: Open.

#8 In shenorrLabTRDF/bseqsc;

· deo999 opened on Feb 10, 2019

Can't find processed datasets

Status: Open.

#7 In shenorrLabTRDF/bseqsc;

· muntahafsamad opened on Jan 27, 2019

pre-processing of scRNA-seq and bulk RNA-seq

Status: Open.

#6 In shenorrLabTRDF/bseqsc;

· InesdeSantiago opened on Sep 18, 2018