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Statescope
Statescope PublicStatescope is a computational framework designed to discover cell states from cell type-specific gene expression profiles inferred from bulk RNA profiles.
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- Statescope Public
Statescope is a computational framework designed to discover cell states from cell type-specific gene expression profiles inferred from bulk RNA profiles.
tgac-vumc/Statescope’s past year of commit activity - StatescopeR Public
tgac-vumc/StatescopeR’s past year of commit activity - CNA_clonality Public
Code associated with manuscript "The added value of genome-wide copy nubers to objectively resolve clonality of multiple lung tumors with ambiguous or inconclusive mutational diagnosis"
tgac-vumc/CNA_clonality’s past year of commit activity - Mutation_Clonality Public
Code associated with manuscript "Performance and considerations in the use of diagnostic mutation panels for clonality testing in non-small-cell lung carcinoma"
tgac-vumc/Mutation_Clonality’s past year of commit activity - OncoBLADE Public
Hidden RNA profiles of cells in the tumor microenvironment accurately revealed by malignant cell fraction-informed deconvolution
tgac-vumc/OncoBLADE’s past year of commit activity - QDNAseq.snakemake Public
tgac-vumc/QDNAseq.snakemake’s past year of commit activity - translocation-snake Public
Translocation detection pipeline by next generation sequencing. A combined approach of BreaKmer, Gridss, Wham and novoBreak.
tgac-vumc/translocation-snake’s past year of commit activity
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