This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.

Python Programming for Biologists

A Gentle Introduction to R, RStudio, and visualization

Training materials for Prism 8

RML Introduction to Structural Biology

Example workflow using LOCUS to identify viral sequences in bulk metagenomic data

The goal of this repository is to provide a series of course materials that is used for online seminars to introduce modern data science practice using the R language.

RNAseq workshop courses and materials

An introduction to NGS sequencing, including an overview of methods, quality control checks, preprocessing, and basic manipulation and mapping of the data.

Introductory notes on using Geneious (Biomatters) at NIAID

The goal of this repository is to provide a series of course materials that is used for online seminars to introduce R programming.

A general introduction for biologists on scRNAseq, with a focus on the difference from bulk RNA-seq

Training Materials for Survey Data Analysis in R (Exposure from NHANES)

Training materials for Statistical Testing

Introductory practical training on preprocessing and QC of RNA Seq data

Training materials for UNIX course

Teaching Materials for 2024-2025 Spatial Transcriptomics workshops, prepared by Margaret Ho (NIAID BCBB Science Support)

Microbiome Data Analysis and Nephele Demo

RNA Seq Course materials as part of the ACE_Uganda bioinformatics course, Spring 2021