DL model to predict HLA peptide presentation
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Jan 31, 2024 - Jupyter Notebook
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peptidomics
Here are 9 public repositories matching this topic...
Shiny App allows streamlined analysis of multiple levels of proteomics data.
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May 30, 2023 - R
Processing, analysis and summary of immunopeptidomics experiment comparing clinical samples cut into chunks vs. digested with tissue digestion kit.
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Jan 2, 2024 - R
R Package - Faster Peptidomic Data Processing and Analysis
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Sep 6, 2023 - R
A PyQt6-based GUI application for venomic data analysis, spectral deconvolution, and statistical similarity indexing of neogastropod peptidomes. Uses a Sequential Analysis Pipeline (SAP)-structured, classical ML algorithm built with sklearn modules as its backend for the actual computational engine.
machine-learning bioinformatics marine-biology sklearn-pipeline peptidomics classical-ml-algorithms sequential-analysis-pipelines
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Jan 6, 2026 - Python
Use dask to process larger-than-memory peptidomic data, then perform multivariable regression
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Mar 18, 2021 - Jupyter Notebook
Differential diagnosis and visualisation of kidney diseases using supervised UMAP
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Mar 18, 2021 - Jupyter Notebook
Detecting single amino acids and small peptides by combining isobaric tags and peptidomics
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Feb 22, 2019 - R
This is a Snakemake pipeline for de novo sequencing and annotation of MS peptidomics data
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Dec 16, 2025 - Python
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