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v0.8.0#42

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Aurel31 merged 115 commits intomainfrom
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Jan 15, 2026
Merged

v0.8.0#42
Aurel31 merged 115 commits intomainfrom
develop

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@Aurel31 Aurel31 commented Jan 15, 2026

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Aurel31 added 30 commits August 16, 2025 14:50
@Aurel31
Merge branch 'main' into dev-metrics
fb16936
@Aurel31
add fill value attribute requirement for std file
1c92cfb
@Aurel31
add check-consistency-namespace in makefile
f933e80 
- checks that the list of variables in namespace is the same between the python class and the documentation
@Aurel31
add missing variables in namespace docs
007f6fb
@Aurel31
add standardization of mtbs data
ef67682
@Aurel31
add mtbs global analysis
116001e
@Aurel31
add caldor benchamrk building damaged
525548b
@Aurel31
improve MTBS workflow
3401312
@Aurel31
Merge branch 'dev-metrics' of https://github.com/wirc-sjsu/firebench …
9b7cf05 
…into dev-metrics
@Aurel31
add caldor fire content
616e4ec
@Aurel31
add is_iso8601 and validate_h5_std functions
6c313ae
@Aurel31
fix logging default level to allow for debug and above
5f5bde9
@Aurel31
fix regex for ISO8601 check and add validate_h5_requirement
3819086 
- regex now handles HH:MM:SS or HH:MM in ISO8601
@Aurel31
add validate_h5_requirement to tools
0a5bd9b
@Aurel31
improve return string of missing items for validate_h5_requirement
737c1b3
@Aurel31
add binary_confusion_matrix construction
dd7427b
@Aurel31
add binary_accuracy for binary confusion matrix
33d5cde
@Aurel31
add performance mertrics for binary confusion matrix
e0ef786 
- binary_f_score, binary_false_positive_rate, binary_negative_predicted_value, binary_precision, binary_recall_rate, binary_specific_rate
@Aurel31
update caldor case docs
fd5b06e
@Aurel31
minor code formatting
c39f8e0
@Aurel31
caldor docs update
ad88121
@Aurel31
add KPI
1a30c3b 
- KPIs add best/lowest score
- add KPIs: Binary Structure Loss Specificity, Binary Structure Loss Negative Predictive Value, Binary Structure Loss F1 Score
- chaneg name of binary_specific_rate function to binary_specificity
- Updaet Caldor benchmarks with new KPIs
@Aurel31
add signing method for dict
d4ebf9d
@Aurel31
add MTBS map to Caldor benchmarks
a6d6864
@Aurel31
refactoring: move time utils for std in standardize package
812ffa8 
- move functions _resolve_tz, datetime_to_iso8601, current_datetime_iso8601 to firebench.standardize.time
- move read_quantity_from_fb_dataset to firebench.standardize.tools
@Aurel31
refactoring standardize_mtbs_from_geotiff
1db8f90
@Aurel31
update std file format for polygons
9c4ba1e
@Aurel31
add mandatory separator for authors lists
e85fdb2 
add merge authors list function
@Aurel31
add collect conflicts function for merging two std files
14438c6
@Aurel31
add merge_trees function and add it to merge_two_std_files
b4d2dc0
Aurel31 added 26 commits January 5, 2026 19:37
@Aurel31
add read_quantity_from_fb_attribute
47e42a7
@Aurel31
add read_quantity_from_fb_attribute to package standardize
f8c7bec
@Aurel31
fix quote in f string
1721934
@Aurel31
refactor read_quantity_from_fb_attribute to accept numerics
d326277 
- add read_numeric_attribute, read_string_attribute, _get_h5_attr, _decode_h5_scalar
@Aurel31
add safeguard for binary cm metrics
17906bb
@Aurel31
add certificates in std definition
4fbead0
@Aurel31
add certificates for std files
ed4210c
@Aurel31
add certificate verification std file
2b6b3bc
@Aurel31
add better exception handling for certificates
ee2facf
@Aurel31
add retrieve_h5_certificates function
9924ba7
@Aurel31
add certification for json
b0c6e97 
- add certification and verif lvl for benchmark
@Aurel31
add VL in score card
49b983a
@Aurel31
change order or certificate to descending
3f93539
@Aurel31
add validate_h5_weather_stations_structure
3aa9677
@Aurel31
add SH_TRUST_HIGHEST to firebench.standardize
76b46e7
@Aurel31
add weather data docs for Caldor
9b274ed
@Aurel31
fix canopy cover loss docs for Caldor
2533289 
- add groups for weather
@Aurel31
add MAE to metrics
c4680f5
@Aurel31
add MAE to package metrics
b3092fc
@Aurel31
add circular_bias_deg
3817eb9
@Aurel31
add air temperature benchmarks docs
f013017
@Aurel31
add final weather bench Caldor doc
4207e57
@Aurel31
fix typos
4ff98c3
@Aurel31
fix tests with new function paths
b012c85
@Aurel31
update documentation
60609df
@Aurel31
Merge branch 'dev-metrics' into develop
f781021
@Aurel31 Aurel31 self-assigned this Jan 15, 2026
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codecov bot commented Jan 15, 2026 •
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Codecov Report

❌ Patch coverage is 23.38583% with 973 lines in your changes missing coverage. Please review.

Files with missing lines Patch % Lines
src/firebench/standardize/tools.py 23.04% 207 Missing ⚠️
src/firebench/standardize/synoptic.py 9.49% 143 Missing ⚠️
src/firebench/signing/std_files.py 14.70% 116 Missing ⚠️
src/firebench/signing/benchmarks.py 20.95% 83 Missing ⚠️
src/firebench/metrics/mtbs/mtbs_analysis.py 11.23% 79 Missing ⚠️
src/firebench/metrics/table.py 11.68% 68 Missing ⚠️
src/firebench/standardize/files.py 12.82% 68 Missing ⚠️
src/firebench/standardize/mtbs.py 22.44% 38 Missing ⚠️
...nch/metrics/confusion_matrix/binary_performance.py 22.85% 27 Missing ⚠️
src/firebench/standardize/ravg.py 30.76% 27 Missing ⚠️
... and 10 more
Files with missing lines Coverage Δ
src/firebench/metrics/__init__.py 100.00% <100.00%> (ø)
src/firebench/metrics/confusion_matrix/__init__.py 100.00% <100.00%> (ø)
src/firebench/metrics/mtbs/__init__.py 100.00% <100.00%> (ø)
src/firebench/metrics/perimeter/shape_index.py 100.00% <100.00%> (ø)
src/firebench/metrics/stats/__init__.py 100.00% <100.00%> (ø)
src/firebench/signing/__init__.py 100.00% <100.00%> (ø)
src/firebench/standardize/__init__.py 100.00% <100.00%> (ø)
src/firebench/standardize/std_file_info.py 100.00% <100.00%> (ø)
src/firebench/tools/__init__.py 100.00% <ø> (ø)
src/firebench/tools/logging_config.py 100.00% <100.00%> (ø)
... and 22 more
🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

@Aurel31 Aurel31 merged commit c213473 into main Jan 15, 2026
24 of 25 checks passed
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