I focus on converting biological problems into computational formulations, with research spanning evolutionary biology, cell signaling, and softare dev.
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resolveS
resolveS PublicA super-fast, memory-efficient tool for automatically determining RNA-Seq strand specificity. Designed for seamless integration into QC pipelines, it ensures accurate parameter configuration for do…
Python
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egps-pathway.evol.browser
egps-pathway.evol.browser PublicBiological pathway evolution across the animal phylum, a comprehensive complex GUI module with full support of the interactive GUI operations and rich functionilities. This is a concrete module for…
Java
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egps-million_evoltree
egps-million_evoltree PublicThis tree builder is optimized for constructing phylogenetic trees from millions of OTUs using multi-threading acceleration. It is based on a modified version of the Neighbor-Joining Tree Algorithm…
Java
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