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Fit ends of rolling median curve linearly Claude Code #194: Issue #1028 opened by etal
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CNVkit on WGBS data Claude Code #193: Issue comment #809 (comment) created by etal
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AttributeError: module 'pomegranate' has no attribute 'NormalDistribution' in hmm-germline Claude Code #192: Issue comment #815 (comment) created by etal
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Error while indexing BAM files Claude Code #191: Issue comment #817 (comment) created by etal
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How to normalise different sequencing coverage samples in CNVKit? Claude Code #190: Issue comment #824 (comment) created by etal
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"Genemetrics" combination algorithm seems to include an additional antitarget bin Claude Code #189: Issue comment #838 (comment) created by etal
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Germ-line exomes, single samples Claude Code #188: Issue comment #673 (comment) created by etal
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Convert SEG format and do CNVkit to analysis ? Claude Code #187: Issue comment #820 (comment) created by etal
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what are the steps for Germline and Somatic CNV detection using CNVkit? Claude Code #186: Issue comment #857 (comment) created by etal
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Best practices for creating a WGS pooled reference Claude Code #185: Issue comment #864 (comment) created by etal
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Need Help with generating Gene level Copy Number Ratio Claude Code #184: Issue comment #865 (comment) created by etal
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cnvkit.py batch hangs on very large WGS dataset Claude Code #183: Issue comment #867 (comment) created by etal
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cnvkit.py batch hangs on very large WGS dataset Claude Code #182: Issue comment #867 (comment) created by etal
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How to merge vcfs of different samples? Claude Code #181: Issue comment #885 (comment) created by etal
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No Results Claude Code #180: Issue comment #889 (comment) created by etal
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Getting BAF and allelic imbalance in export vcf Claude Code #179: Issue comment #892 (comment) created by etal
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Somatic CNV calling in case of pre-existing CNVs Claude Code #178: Issue comment #897 (comment) created by etal
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Unable to load BED file with skgenome Claude Code #177: Issue comment #899 (comment) created by etal
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Add BICseq segment-filtering method Claude Code #176: Issue comment #46 (comment) created by etal
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Export Sequenza "seqz" format Claude Code #175: Issue comment #204 (comment) created by etal
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segment: Add "meanshift" method Claude Code #174: Issue comment #330 (comment) created by etal
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Improve segment merging Claude Code #173: Issue comment #1006 (comment) created by codecov bot
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batch: include 'segmetrics' and 'call' steps Claude Code #172: Issue comment #277 (comment) created by etal
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Merging segments while running pipeline Claude Code #171: Issue comment #895 (comment) created by etal
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Error with segment Claude Code #170: Issue comment #1002 (comment) created by etal
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